CRAN Package Check Results for Package spaa

Last updated on 2014-04-16 11:47:27.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.1 0.87 14.80 15.67 OK
r-devel-linux-x86_64-debian-gcc 0.2.1 0.79 15.11 15.90 OK
r-devel-linux-x86_64-fedora-clang 0.2.1 30.47 OK
r-devel-linux-x86_64-fedora-gcc 0.2.1 28.75 OK
r-devel-macosx-x86_64-clang 0.2.1 28.65 OK
r-devel-macosx-x86_64-gcc 0.2.1 ERROR
r-devel-windows-ix86+x86_64 0.2.1 2.00 24.00 26.00 OK
r-patched-linux-x86_64 0.2.1 0.77 14.94 15.71 OK
r-patched-solaris-sparc 0.2.1 174.70 OK
r-patched-solaris-x86 0.2.1 40.30 OK
r-release-linux-ix86 0.2.1 2.00 28.00 30.00 OK
r-release-linux-x86_64 0.2.1 0.78 14.98 15.76 OK
r-release-windows-ix86+x86_64 0.2.1 2.00 25.00 27.00 OK
r-oldrel-windows-ix86+x86_64 0.2.1 3.00 24.00 27.00 OK

Check Details

Version: 0.2.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘vegan’
Flavor: r-devel-macosx-x86_64-gcc

Version: 0.2.1
Check: examples
Result: ERROR
    Running examples in ‘spaa-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: plotlowertri
    > ### Title: Plotting lower semi matrix
    > ### Aliases: plotlowertri
    > ### Keywords: lower matrix semimatrix
    >
    > ### ** Examples
    >
    > data(testdata)
    > spmatrix <- data2mat(testdata)
    > result <- sp.pair(spmatrix)
    >
    > ## Check the legend for 0.00 to 0.33 (Unwanted label)
    > plotlowertri(result$Pearson, int = 0.5, cex=1.5)
    Warning: Too few rows, please adjust the legend using "cex" and "int".
     Some of the points may be missing due to the distribution of data.
     You may also have to choose an appropriate number of intervals
     using "interval" and "pchlist".
    > title("Pearson Correlation Lower Matrix Plot")
    >
    > ## Change the size of points and reset the intervals.
    > ## Warning: The lower matrix plot illustrating Pearson
    > ## Correlation between each pair of species. Note the
    > ## triangle didn't appeared in the plots, but have been
    > ## added to the legend. This is due to the distribution
    > ## of data. Be careful in selection of intervals.
    >
    >
    > plotlowertri(result$Pearson, int = 0.5, cex=1.5,
    + interval = 4, pchlist = c(19, 17, 15, 1, 5), size = TRUE)
    Warning: Too few rows, please adjust the legend using "cex" and "int".
     Some of the points may be missing due to the distribution of data.
     You may also have to choose an appropriate number of intervals
     using "interval" and "pchlist".
    >
    > title("Pearson Correlation Lower Matrix Plot")
    >
    > ## "Pure" dots, may have to add legend manually...
    > plotlowertri(result$Pearson, int = 0.5, cex=2.5,
    + interval = 4, pchlist = rep(19, 5), size = TRUE,
    + show.legend = FALSE)
    Warning: Too few rows, please adjust the legend using "cex" and "int".
     Some of the points may be missing due to the distribution of data.
     You may also have to choose an appropriate number of intervals
     using "interval" and "pchlist".
    >
    > title("Pearson Correlation Lower Matrix Plot")
    >
    >
    > ## Using BCI data
    > library(vegan)
    Error in library(vegan) : there is no package called ‘vegan’
    Execution halted
Flavor: r-devel-macosx-x86_64-gcc