CRAN Package Check Results for Package lme4

Last updated on 2014-10-01 15:50:01.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1-7 39.34 386.94 426.28 NOTE
r-devel-linux-x86_64-debian-gcc 1.1-7 42.60 382.36 424.97 NOTE
r-devel-linux-x86_64-fedora-clang 1.1-7 976.16 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1-7 936.77 NOTE
r-devel-osx-x86_64-clang 1.1-7 679.83 NOTE
r-devel-windows-ix86+x86_64 1.1-7 113.00 841.00 954.00 NOTE
r-patched-linux-x86_64 1.1-7 43.20 440.46 483.67 NOTE
r-patched-solaris-sparc 1.1-7 3972.70 ERROR
r-patched-solaris-x86 1.1-7 1273.70 NOTE
r-release-linux-ix86 1.1-7 53.91 535.98 589.89 NOTE
r-release-linux-x86_64 1.1-7 45.63 442.51 488.14 NOTE
r-release-osx-x86_64-mavericks 1.1-7 NOTE
r-release-osx-x86_64-snowleopard 1.1-7 NOTE
r-release-windows-ix86+x86_64 1.1-7 110.00 983.00 1093.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1-7 113.00 949.00 1062.00 NOTE

Memtest notes: UBSAN-gcc UBSAN-gcc

Check Details

Version: 1.1-7
Check: installed package size
Result: NOTE
     installed size is 23.1Mb
     sub-directories of 1Mb or more:
     doc 1.3Mb
     libs 19.0Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-7
Check: R code for possible problems
Result: NOTE
    GQdk: no visible binding for global variable ‘GQN’
    vcov.merMod : calc.vcov.hess: no visible global function definition for
     ‘forceSymmetric’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.1-7
Check: tests
Result: ERROR
    Running the tests in ‘tests/testOptControl.R’ failed.
    Last 13 lines of output:
     Loading required package: Rcpp
     > dat <- read.csv(system.file("testdata","dat20101314.csv",package="lme4"))
     > NMcopy <- lme4:::Nelder_Mead
     >
     > cc <- capture.output(lmer(y ~ (1|Operator)+(1|Part)+(1|Part:Operator), data=dat,
     + control=
     + lmerControl("NMcopy",
     + optCtrl= list(iprint=20))))
     > ## check that printing goes through step 140 twice and up to 240 once
     > findStep <- function(str,n) sum(grepl(paste0("^\\(NM\\) ",n,": "),cc))
     > stopifnot(findStep(cc,140)==2 && findStep(cc,240)==1)
     Error: findStep(cc, 140) == 2 && findStep(cc, 240) == 1 is not TRUE
     Execution halted
Flavor: r-patched-solaris-sparc

Version: 1.1-7
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: Rcpp
    Computing profile confidence intervals ...
    Computing bootstrap confidence intervals ...
    Loading required package: mgcv
    Loading required package: nlme
    
    Attaching package: 'nlme'
    
    The following object is masked from 'package:lme4':
    
     lmList
    
    This is mgcv 1.8-1. For overview type 'help("mgcv-package")'.
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'lmer.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `blkarray.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    st/lme4/vignettes/lmer.tex:61: ==> Fatal error occurred, no output PDF file pr
    oduced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks