CRAN Package Check Results for Package bayesMCClust

Last updated on 2014-09-29 15:47:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 1.50 38.72 40.22 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 1.45 38.04 39.49 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 82.01 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 76.22 NOTE
r-devel-osx-x86_64-clang 1.0 72.12 NOTE
r-devel-windows-ix86+x86_64 1.0 7.00 62.00 69.00 NOTE
r-patched-linux-x86_64 1.0 1.62 40.64 42.26 NOTE
r-patched-solaris-sparc 1.0 475.20 NOTE
r-patched-solaris-x86 1.0 101.10 NOTE
r-release-linux-ix86 1.0 2.24 58.32 60.55 NOTE
r-release-linux-x86_64 1.0 1.48 47.16 48.64 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-osx-x86_64-snowleopard 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 6.00 72.00 78.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 6.00 68.00 74.00 NOTE

Check Details

Version: 1.0
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     ‘gplots’ ‘xtable’ ‘mnormt’ ‘MASS’ ‘bayesm’ ‘boa’ ‘e1071’ ‘gtools’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘MASS’ ‘bayesm’ ‘boa’ ‘e1071’ ‘gplots’ ‘gtools’ ‘mnormt’ ‘xtable’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    calcMSCritDMC: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    calcMSCritDMCExt: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    calcMSCritMCC: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    calcMSCritMCCExt: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    MNLAuxMix: no visible global function definition for ‘mvrnorm’
    calcEntropy: no visible global function definition for ‘xtable’
    calcEquiDist: no visible global function definition for ‘xtable’
    calcEquiDist: no visible global function definition for ‘barplot2’
    calcLongRunDist: no visible global function definition for ‘barplot2’
    calcLongRunDist: no visible global function definition for ‘xtable’
    calcMSCritMCCExt: no visible global function definition for ‘rmnorm’
    calcMSCritMCCExt: no visible global function definition for ‘dmnorm’
    calcNumEff : <anonymous>: no visible global function definition for
     ‘numEff’
    calcNumEff: no visible global function definition for ‘xtable’
    calcParMatDMC: no visible global function definition for ‘xtable’
    calcRegCoeffs: no visible binding for global variable ‘boa.hpd’
    calcRegCoeffs: no visible global function definition for ‘xtable’
    calcSegmentationPower: no visible global function definition for
     ‘xtable’
    calcTransProbs: no visible global function definition for ‘xtable’
    calcVariationDMC: no visible global function definition for ‘xtable’
    dmClust: no visible global function definition for ‘ddirichlet’
    dmClustExtended: no visible global function definition for ‘mvrnorm’
    mcClust : dirDensFun: no visible global function definition for
     ‘ddirichlet’
    mcClust: no visible global function definition for ‘ddirichlet’
    mcClustExtended : dirDensFun: no visible global function definition for
     ‘ddirichlet’
    mcClustExtended: no visible global function definition for ‘mvrnorm’
    plotTransProbs : <anonymous>: no visible global function definition for
     ‘balloonplot’
    plotTransProbs: no visible global function definition for ‘balloonplot’
    plotTransProbs: no visible global function definition for ‘xtable’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'MNLAuxMix.Rd':
     \examples lines wider than 100 characters:
     X = cbind( intercept=1, alrateBezNew, unskilled, skilled, angStart ) ),
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    calcMSCritDMC: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    calcMSCritDMCExt: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    calcMSCritMCC: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
    calcMSCritMCCExt: warning in ls(all = TRUE): partial argument match of
     ‘all’ to ‘all.names’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64