CRAN Package Check Results for Package R2OpenBUGS

Last updated on 2016-05-29 08:46:44.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 3.2-3.1 0.95 22.14 23.09 NOTE
r-devel-linux-x86_64-fedora-clang 3.2-3.1 39.59 NOTE
r-devel-linux-x86_64-fedora-gcc 3.2-3.1 37.85 NOTE
r-devel-osx-x86_64-clang 3.2-3.1 44.94 NOTE --no-tests
r-devel-windows-ix86+x86_64 3.2-3.1 3.00 45.00 48.00 NOTE
r-patched-linux-x86_64 3.2-3.1 0.97 21.10 22.07 NOTE
r-patched-solaris-sparc 3.2-3.1 244.30 NOTE --no-tests
r-patched-solaris-x86 3.2-3.1 46.80 NOTE --no-tests
r-release-linux-x86_64 3.2-3.1 0.90 20.95 21.85 NOTE
r-release-osx-x86_64-mavericks 3.2-3.1 WARN
r-release-windows-ix86+x86_64 3.2-3.1 6.00 47.00 53.00 NOTE
r-oldrel-windows-ix86+x86_64 3.2-3.1 4.00 62.00 66.00 OK

Check Details

Version: 3.2-3.1
Check: R code for possible problems
Result: NOTE
    as.bugs.array: no visible global function definition for ‘var’
    attach.all: no visible global function definition for ‘menu’
    bugs.plot.inferences: no visible global function definition for ‘par’
    bugs.plot.inferences: no visible global function definition for ‘plot’
    bugs.plot.inferences: no visible global function definition for
     ‘strwidth’
    bugs.plot.inferences: no visible global function definition for ‘text’
    bugs.plot.inferences: no visible global function definition for
     ‘strheight’
    bugs.plot.inferences: no visible global function definition for
     ‘median’
    bugs.plot.inferences: no visible global function definition for
     ‘quantile’
    bugs.plot.inferences: no visible global function definition for ‘lines’
    bugs.plot.inferences: no visible global function definition for
     ‘points’
    bugs.plot.summary: no visible global function definition for ‘median’
    bugs.plot.summary: no visible global function definition for ‘quantile’
    bugs.plot.summary: no visible global function definition for ‘par’
    bugs.plot.summary: no visible global function definition for ‘plot’
    bugs.plot.summary: no visible global function definition for ‘strwidth’
    bugs.plot.summary: no visible global function definition for ‘text’
    bugs.plot.summary: no visible global function definition for ‘lines’
    bugs.plot.summary: no visible global function definition for ‘points’
    bugs.sims: no visible global function definition for ‘read.table’
    bugs.sims: no visible global function definition for ‘var’
    conv.par: no visible binding for global variable ‘var’
    conv.par: no visible global function definition for ‘quantile’
    conv.par: no visible global function definition for ‘var’
    conv.par: no visible global function definition for ‘qf’
    findOpenBUGS: no visible binding for global variable ‘compareVersion’
    findOpenBUGS: no visible global function definition for
     ‘compareVersion’
    monitor: no visible global function definition for ‘sd’
    plot.bugs: no visible global function definition for ‘par’
    plot.bugs: no visible global function definition for ‘layout’
    plot.bugs: no visible global function definition for ‘mtext’
    validateInstallOpenBUGS: no visible global function definition for
     ‘flush.console’
    Undefined global functions or variables:
     compareVersion flush.console layout lines median menu mtext par plot
     points qf quantile read.table sd strheight strwidth text var
    Consider adding
     importFrom("graphics", "layout", "lines", "mtext", "par", "plot",
     "points", "strheight", "strwidth", "text")
     importFrom("stats", "median", "qf", "quantile", "sd", "var")
     importFrom("utils", "compareVersion", "flush.console", "menu",
     "read.table")
    to your NAMESPACE file.
    
    Found the following calls to attach():
    File ‘R2OpenBUGS/R/attach.all.R’:
     attach(x, name = name)
    See section ‘Good practice’ in ‘?attach’.
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.2-3.1
Check: R code for possible problems
Result: NOTE
    as.bugs.array: no visible global function definition for ‘var’
    attach.all: no visible global function definition for ‘menu’
    bugs.plot.inferences: no visible global function definition for ‘par’
    bugs.plot.inferences: no visible global function definition for ‘plot’
    bugs.plot.inferences: no visible global function definition for
     ‘strwidth’
    bugs.plot.inferences: no visible global function definition for ‘text’
    bugs.plot.inferences: no visible global function definition for
     ‘strheight’
    bugs.plot.inferences: no visible global function definition for
     ‘median’
    bugs.plot.inferences: no visible global function definition for
     ‘quantile’
    bugs.plot.inferences: no visible global function definition for ‘lines’
    bugs.plot.inferences: no visible global function definition for
     ‘points’
    bugs.plot.summary: no visible global function definition for ‘median’
    bugs.plot.summary: no visible global function definition for ‘quantile’
    bugs.plot.summary: no visible global function definition for ‘par’
    bugs.plot.summary: no visible global function definition for ‘plot’
    bugs.plot.summary: no visible global function definition for ‘strwidth’
    bugs.plot.summary: no visible global function definition for ‘text’
    bugs.plot.summary: no visible global function definition for ‘lines’
    bugs.plot.summary: no visible global function definition for ‘points’
    bugs.sims: no visible global function definition for ‘read.table’
    bugs.sims: no visible global function definition for ‘var’
    conv.par: no visible binding for global variable ‘var’
    conv.par: no visible global function definition for ‘quantile’
    conv.par: no visible global function definition for ‘var’
    conv.par: no visible global function definition for ‘qf’
    findOpenBUGS: no visible binding for global variable ‘compareVersion’
    findOpenBUGS: no visible global function definition for
     ‘compareVersion’
    monitor: no visible global function definition for ‘sd’
    plot.bugs: no visible global function definition for ‘par’
    plot.bugs: no visible global function definition for ‘layout’
    plot.bugs: no visible global function definition for ‘mtext’
    validateInstallOpenBUGS: no visible global function definition for
     ‘flush.console’
    Undefined global functions or variables:
     compareVersion flush.console layout lines median menu mtext par plot
     points qf quantile read.table sd strheight strwidth text var
    Consider adding
     importFrom("graphics", "layout", "lines", "mtext", "par", "plot",
     "points", "strheight", "strwidth", "text")
     importFrom("stats", "median", "qf", "quantile", "sd", "var")
     importFrom("utils", "compareVersion", "flush.console", "menu",
     "read.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-osx-x86_64-mavericks

Version: 3.2-3.1
Flags: --no-tests
Check: R code for possible problems
Result: NOTE
    as.bugs.array: no visible global function definition for ‘var’
    attach.all: no visible global function definition for ‘menu’
    bugs.plot.inferences: no visible global function definition for ‘par’
    bugs.plot.inferences: no visible global function definition for ‘plot’
    bugs.plot.inferences: no visible global function definition for
     ‘strwidth’
    bugs.plot.inferences: no visible global function definition for ‘text’
    bugs.plot.inferences: no visible global function definition for
     ‘strheight’
    bugs.plot.inferences: no visible global function definition for
     ‘median’
    bugs.plot.inferences: no visible global function definition for
     ‘quantile’
    bugs.plot.inferences: no visible global function definition for ‘lines’
    bugs.plot.inferences: no visible global function definition for
     ‘points’
    bugs.plot.summary: no visible global function definition for ‘median’
    bugs.plot.summary: no visible global function definition for ‘quantile’
    bugs.plot.summary: no visible global function definition for ‘par’
    bugs.plot.summary: no visible global function definition for ‘plot’
    bugs.plot.summary: no visible global function definition for ‘strwidth’
    bugs.plot.summary: no visible global function definition for ‘text’
    bugs.plot.summary: no visible global function definition for ‘lines’
    bugs.plot.summary: no visible global function definition for ‘points’
    bugs.sims: no visible global function definition for ‘read.table’
    bugs.sims: no visible global function definition for ‘var’
    conv.par: no visible binding for global variable ‘var’
    conv.par: no visible global function definition for ‘quantile’
    conv.par: no visible global function definition for ‘var’
    conv.par: no visible global function definition for ‘qf’
    findOpenBUGS: no visible binding for global variable ‘compareVersion’
    findOpenBUGS: no visible global function definition for
     ‘compareVersion’
    monitor: no visible global function definition for ‘sd’
    plot.bugs: no visible global function definition for ‘par’
    plot.bugs: no visible global function definition for ‘layout’
    plot.bugs: no visible global function definition for ‘mtext’
    validateInstallOpenBUGS: no visible global function definition for
     ‘flush.console’
    Undefined global functions or variables:
     compareVersion flush.console layout lines median menu mtext par plot
     points qf quantile read.table sd strheight strwidth text var
    Consider adding
     importFrom("graphics", "layout", "lines", "mtext", "par", "plot",
     "points", "strheight", "strwidth", "text")
     importFrom("stats", "median", "qf", "quantile", "sd", "var")
     importFrom("utils", "compareVersion", "flush.console", "menu",
     "read.table")
    to your NAMESPACE file.
Flavors: r-devel-osx-x86_64-clang, r-patched-solaris-sparc, r-patched-solaris-x86

Version: 3.2-3.1
Check: R code for possible problems
Result: NOTE
    as.bugs.array: no visible global function definition for 'var'
    attach.all: no visible global function definition for 'winDialog'
    attach.all: no visible global function definition for 'menu'
    bugs.plot.inferences: no visible global function definition for 'par'
    bugs.plot.inferences: no visible global function definition for 'plot'
    bugs.plot.inferences: no visible global function definition for
     'strwidth'
    bugs.plot.inferences: no visible global function definition for 'text'
    bugs.plot.inferences: no visible global function definition for
     'strheight'
    bugs.plot.inferences: no visible global function definition for
     'median'
    bugs.plot.inferences: no visible global function definition for
     'quantile'
    bugs.plot.inferences: no visible global function definition for 'lines'
    bugs.plot.inferences: no visible global function definition for
     'points'
    bugs.plot.summary: no visible global function definition for 'median'
    bugs.plot.summary: no visible global function definition for 'quantile'
    bugs.plot.summary: no visible global function definition for 'par'
    bugs.plot.summary: no visible global function definition for 'plot'
    bugs.plot.summary: no visible global function definition for 'strwidth'
    bugs.plot.summary: no visible global function definition for 'text'
    bugs.plot.summary: no visible global function definition for 'lines'
    bugs.plot.summary: no visible global function definition for 'points'
    bugs.sims: no visible global function definition for 'read.table'
    bugs.sims: no visible global function definition for 'var'
    conv.par: no visible binding for global variable 'var'
    conv.par: no visible global function definition for 'quantile'
    conv.par: no visible global function definition for 'var'
    conv.par: no visible global function definition for 'qf'
    findOpenBUGS: no visible binding for global variable 'compareVersion'
    findOpenBUGS: no visible global function definition for
     'compareVersion'
    monitor: no visible global function definition for 'sd'
    plot.bugs: no visible global function definition for 'par'
    plot.bugs: no visible global function definition for 'layout'
    plot.bugs: no visible global function definition for 'mtext'
    validateInstallOpenBUGS: no visible global function definition for
     'flush.console'
    Undefined global functions or variables:
     compareVersion flush.console layout lines median menu mtext par plot
     points qf quantile read.table sd strheight strwidth text var
     winDialog
    Consider adding
     importFrom("graphics", "layout", "lines", "mtext", "par", "plot",
     "points", "strheight", "strwidth", "text")
     importFrom("stats", "median", "qf", "quantile", "sd", "var")
     importFrom("utils", "compareVersion", "flush.console", "menu",
     "read.table", "winDialog")
    to your NAMESPACE file.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 3.2-3.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in grepl("(Rerun to get|biblatex.*\\(re\\)run)", readLines(log, :
     input string 231 is invalid in this locale
    Warning in grepl("(Rerun to get|biblatex.*\\(re\\)run)", readLines(log, :
     input string 232 is invalid in this locale
    Warning in grepl("(Rerun to get|biblatex.*\\(re\\)run)", readLines(log, :
     input string 240 is invalid in this locale
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'R2OpenBUGS.tex' failed.
    LaTeX errors:
    ! Undefined control sequence.
    l.15 x<9c><ed>\AL
     ^^[W^^S^^^^^L^^FL<8c><97><a7>^^R0N^^V̪nCq<8d><cb>V<88> ^^Q~UT<ad><9a>*<f4><92>S<a2><f6>ƥ<97><f6><94>^^^<a3>ޫ^^...
    The control sequence at the end of the top line
    of your error message was never \def'ed. If you have
    ! Extra }, or forgotten \endgroup.
    l.18 ...Tf<92><95><d4>/<aa>^^@e<e1>p^^X9<ee><ec><ec><8c>D"<99>L<a6><b1><b1><f1><e5><97>_<ce>f<b3>O<9e><<d1>u}}
     }<bd><b9><b9><b9><bf><bf>?<9f><cf>744,,,tww<af><ad><ad>577^...
    I've deleted a group-closing symbol because it seems to be
    spurious, as in `$x}$'. But perhaps the } is legitimate and
    ! Extra }, or forgotten \endgroup.
    l.18 ...f<92><95><d4>/<aa>^^@e<e1>p^^X9<ee><ec><ec><8c>D"<99>L<a6><b1><b1><f1><e5><97>_<ce>f<b3>O<9e><<d1>u}}}
     <bd><b9><b9><b9><bf><bf>?<9f><cf>744,,,tww<af><ad><ad>577^^...
    I've deleted a
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks