CRAN Package Check Results for Package MetaQC

Last updated on 2014-08-11 15:49:35.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.13 0.82 14.20 15.02 NOTE
r-devel-linux-x86_64-debian-gcc 0.1.13 0.80 13.70 14.50 NOTE
r-devel-linux-x86_64-fedora-clang 0.1.13 31.81 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.13 27.64 NOTE
r-devel-osx-x86_64-clang 0.1.13 30.49 NOTE
r-devel-windows-ix86+x86_64 0.1.13 4.00 25.00 29.00 NOTE
r-patched-linux-x86_64 0.1.13 0.83 13.56 14.40 NOTE
r-patched-solaris-sparc 0.1.13 167.50 NOTE
r-patched-solaris-x86 0.1.13 39.80 NOTE
r-release-linux-ix86 0.1.13 1.30 20.22 21.52 NOTE
r-release-linux-x86_64 0.1.13 0.85 14.33 15.18 NOTE
r-release-osx-x86_64-mavericks 0.1.13 NOTE
r-release-osx-x86_64-snowleopard 0.1.13 NOTE
r-release-windows-ix86+x86_64 0.1.13 4.00 24.00 28.00 NOTE
r-oldrel-windows-ix86+x86_64 0.1.13 4.00 24.00 28.00 NOTE

Check Details

Version: 0.1.13
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘foreach’ ‘iterators’ ‘proto’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.13
Check: R code for possible problems
Result: NOTE
    GMT2List: no visible binding for global variable ‘x’
    MetaQC : .FilterGenes: no visible binding for global variable ‘d’
    MetaQC : .ConvertToGeneSetIdx: no visible binding for global variable
     ‘g’
    MetaQC : .ConvertToGeneSetIdx: no visible binding for global variable
     ‘d’
    MetaQC : .CalcPval: no visible binding for global variable ‘i’
    MetaQC : .CalcPval: no visible binding for global variable ‘w’
    MetaQC : .CalcPval: no visible binding for global variable ‘j’
    MetaQC : .CalcPval: no visible binding for global variable ‘b’
    MetaQC : EQC: no visible binding for global variable ‘g’
    MetaQC : EQC: no visible binding for global variable ‘w’
    MetaQC : AQCg: no visible binding for global variable ‘i’
    MetaQC : AQCp: no visible binding for global variable ‘i’
    MetaQC : CQCg: no visible binding for global variable ‘dat’
    MetaQC : CQCg: no visible binding for global variable ‘pv’
    MetaQC : CQCg: no visible binding for global variable ‘i’
    MetaQC : CQCp: no visible binding for global variable ‘dat’
    MetaQC : CQCp: no visible binding for global variable ‘pv’
    MetaQC : CQCp: no visible binding for global variable ‘ii’
    MetaQC : CQCp: no visible binding for global variable ‘jj’
    MetaQC : CQCp: no visible binding for global variable ‘i’
    MetaQC : IQC: no visible binding for global variable ‘i’
    MetaQC : .CalcDistOfStudies: no visible binding for global variable
     ‘ii’
    MetaQC : .CalcDistOfStudies: no visible binding for global variable
     ‘jj’
    MetaQC : .CalcScores: no visible binding for global variable ‘d’
    requireAll: no visible binding for global variable ‘biocLite’
    requireAll: no visible global function definition for ‘biocLite’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 0.1.13
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.13
Check: R code for possible problems
Result: NOTE
    GMT2List: no visible binding for global variable 'x'
    MetaQC: no visible global function definition for 'registerDoMC'
    MetaQC : .FilterGenes: no visible binding for global variable 'd'
    MetaQC : .ConvertToGeneSetIdx: no visible binding for global variable
     'g'
    MetaQC : .ConvertToGeneSetIdx: no visible binding for global variable
     'd'
    MetaQC : .CalcPval: no visible binding for global variable 'i'
    MetaQC : .CalcPval: no visible binding for global variable 'w'
    MetaQC : .CalcPval: no visible binding for global variable 'j'
    MetaQC : .CalcPval: no visible binding for global variable 'b'
    MetaQC : EQC: no visible binding for global variable 'g'
    MetaQC : EQC: no visible binding for global variable 'w'
    MetaQC : AQCg: no visible binding for global variable 'i'
    MetaQC : AQCp: no visible binding for global variable 'i'
    MetaQC : CQCg: no visible binding for global variable 'dat'
    MetaQC : CQCg: no visible binding for global variable 'pv'
    MetaQC : CQCg: no visible binding for global variable 'i'
    MetaQC : CQCp: no visible binding for global variable 'dat'
    MetaQC : CQCp: no visible binding for global variable 'pv'
    MetaQC : CQCp: no visible binding for global variable 'ii'
    MetaQC : CQCp: no visible binding for global variable 'jj'
    MetaQC : CQCp: no visible binding for global variable 'i'
    MetaQC : IQC: no visible binding for global variable 'i'
    MetaQC : .CalcDistOfStudies: no visible binding for global variable
     'ii'
    MetaQC : .CalcDistOfStudies: no visible binding for global variable
     'jj'
    MetaQC : .CalcScores: no visible binding for global variable 'd'
    requireAll: no visible binding for global variable 'biocLite'
    requireAll: no visible global function definition for 'biocLite'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64